60 releases (38 stable)
| 12.5.0 | Nov 14, 2025 |
|---|---|
| 12.3.0 | May 6, 2025 |
| 12.2.0 | Mar 6, 2025 |
| 11.1.1 | Jan 21, 2025 |
| 0.1.0-alpha.6 | Jul 22, 2020 |
#7 in #compact-representation
957 downloads per month
Used in 15 crates
(9 directly)
140KB
3K
SLoC
This crate abstracts over the representation of a genome string, allowing for different implementations that are catered to different use-cases.
Compact Genome
A Rust crate to represent a genome string in memory.
The crate defines trait abstractions over a genome string, and provides different compact implementations. At the moment, a bitpacked representation along with a basic ASCII representation of the base characters are supported.
Dependencies
~1.4–2MB
~44K SLoC